Package: ridigbio 0.4.1
Jesse Bennett
ridigbio: Interface to the iDigBio Data API
An interface to iDigBio's search API that allows downloading specimen records. Searches are returned as a data.frame. Other functions such as the metadata end points return lists of information. iDigBio is a US project focused on digitizing and serving museum specimen collections on the web. See <https://www.idigbio.org> for information on iDigBio.
Authors:
ridigbio_0.4.1.tar.gz
ridigbio_0.4.1.zip(r-4.5)ridigbio_0.4.1.zip(r-4.4)ridigbio_0.4.1.zip(r-4.3)
ridigbio_0.4.1.tgz(r-4.4-any)ridigbio_0.4.1.tgz(r-4.3-any)
ridigbio_0.4.1.tar.gz(r-4.5-noble)ridigbio_0.4.1.tar.gz(r-4.4-noble)
ridigbio_0.4.1.tgz(r-4.4-emscripten)ridigbio_0.4.1.tgz(r-4.3-emscripten)
ridigbio.pdf |ridigbio.html✨
ridigbio/json (API)
NEWS
# Install 'ridigbio' in R: |
install.packages('ridigbio', repos = c('https://idigbio.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/idigbio/ridigbio/issues
Last updated 2 months agofrom:7d6834c1d7. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 27 2024 |
R-4.5-win | OK | Oct 27 2024 |
R-4.5-linux | OK | Oct 27 2024 |
R-4.4-win | OK | Oct 27 2024 |
R-4.4-mac | OK | Oct 27 2024 |
R-4.3-win | OK | Oct 27 2024 |
R-4.3-mac | OK | Oct 27 2024 |
Exports:idig_build_attribidig_count_mediaidig_count_recordsidig_meta_fieldsidig_searchidig_search_mediaidig_search_recordsidig_top_mediaidig_top_recordsidig_view_mediaidig_view_records
Dependencies:askpassbackportsbase64encbitbit64blobbroombslibcachemcallrcellrangerclicliprcolorspaceconflictedcowplotcpp11crayoncrosstalkcurldata.tableDBIdbplyrdigestdplyrdtplyrevaluatefansifarverfastmapfontawesomeforcatsfsgarglegenericsggplot2gluegoogledrivegooglesheets4gtablehavenhighrhmshtmltoolshtmlwidgetshttridsisobandjquerylibjsonlitekableExtraknitrlabelinglatticelazyevalleafletleaflet.providerslifecyclelubridatemagrittrMASSMatrixmemoisemgcvmimemodelrmunsellnlmeopensslpillarpkgconfigplyrpngprettyunitsprocessxprogresspspurrrR6raggrappdirsrasterRColorBrewerRcppreadrreadxlrematchrematch2reprexrlangrmarkdownrstudioapirvestsassscalesselectrspstringistringrsvglitesyssystemfontsterratextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbutf8uuidvctrsviridisLitevroomwithrxfunxml2yaml
Fields in ridigbio
Rendered fromFields.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-09-27
Started: 2024-07-16
Identification of Data Flags
Rendered fromIDDataFlags.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-09-27
Started: 2024-07-16
Identification of Modified Data
Rendered fromModifiedDataID.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-09-27
Started: 2024-07-16
Identification of Suspicious Coordinates
Rendered fromBadCoordinateID.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-09-03
Started: 2024-07-16
Introduction to ridigbio
Rendered fromBasicUsage.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-09-27
Started: 2024-07-16
Media API Demo
Rendered fromMediaAPIDemo.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-09-27
Started: 2024-07-16
Record API Demo
Rendered fromRecordAPIDemo.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-09-27
Started: 2024-07-16
ridigbio
Rendered fromridigbio.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-07-16
Started: 2024-07-16
Tissue Samples Locator Demo
Rendered fromFindTissue.Rmd
usingknitr::rmarkdown
on Oct 27 2024.Last update: 2024-09-27
Started: 2024-07-16
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Build fields and fields_exclude for queries. | build_field_lists |
Attribution dataframe of iDigBio records query | idig_build_attrib |
check HTTP code | idig_check |
Check is the request returned an error. | idig_check_error |
Count media endpoint | idig_count_media |
Count record endpoint | idig_count_records |
internal GET request | idig_GET |
meta fields endpoint | idig_meta_fields |
parse successfully returned request | idig_parse |
internal POST request | idig_POST |
Basic searching of iDigBio records | idig_search |
Searching of iDigBio media records | idig_search_media |
Searching of iDigBio records | idig_search_records |
Top media endpoint | idig_top_media |
Top records endpoint | idig_top_records |
base URL | idig_url |
validate fields | idig_validate |
API version | idig_version |
view media endpoint | idig_view_media |
view specimen endpoint | idig_view_records |
Stub function for passing import checks | ignore_unused_imports |
Retrieve data from the iDigBio specimen data repository. | ridigbio |